| Shiranui SwordmasterSavage Strike · 018 | Savage Strike | 018 | Common | €0.12 |
| Shiranui SwordsagaSavage Strike · 040 | Savage Strike | 040 | Common | €0.08 |
| Shire, Lightsworn SpiritStardust Overdrive · 082 | Stardust Overdrive | 082 | Super Rare | €0.21 |
| Shock SurpriseHigh-Speed Riders · 012 | High-Speed Riders | 012 | Rare | €0.26 |
| ShocktopusOrder of Chaos · 006 | Order of Chaos | 006 | Common | €0.08 |
| Shock Troops of the Ice BarrierDuel Terminal 3 · 025 | Duel Terminal 3 | 025 | Duel Terminal Normal Parallel Rare | €0.11 |
| Shogi KnightPrimal Origin · 094 | Primal Origin | 094 | Common | €0.05 |
| Shogi LanceThe New Challengers · 097 | The New Challengers | 097 | Common | $0.04 |
| Shootingcode TalkerFists of the Gadgets · 044 | Fists of the Gadgets | 044 | Super Rare | €0.10 |
| Shooting Majestic Star DragonDawn of Majesty · 039 | Dawn of Majesty | 039 | Secret Rare | €1.78 |
| Shooting Quasar DragonShonen Jump December 2011 subscription bonus · 055 | Shonen Jump December 2011 subscription bonus | 055 | Ultra Rare | $2.11 |
| Shooting Riser DragonWeekly Shonen Jump July 2018 membership promotional card · 085 | Weekly Shonen Jump July 2018 membership promotional card | 085 | Ultra Rare | $2.37 |
| Shooting StarDragons of Legend · 026 | Dragons of Legend | 026 | Secret Rare | €0.09 |
| Shooting Star Bow - CealDark Crisis · 033 | Dark Crisis | 033 | Common | $0.23 |
| Shooting Star DragonCollectible Tins 2010 Wave 2 · 004 | Collectible Tins 2010 Wave 2 | 004 | Secret Rare | €0.14 |
| Shooting Star Dragon T.G. EXGhosts From the Past · 044 | Ghosts From the Past | 044 | Ultra Rare | €0.21 |
| Shopina the Melodious MaestraThe New Challengers · 007 | The New Challengers | 007 | Rare | €0.15 |
| Shore KnightAbyss Rising · 032 | Abyss Rising | 032 | Rare | €0.07 |
| Short CircuitLight of Destruction · 056 | Light of Destruction | 056 | Common | €0.08 |
| Shovel CrusherChampion Pack: Game Seven · 012 | Champion Pack: Game Seven | 012 | Common | €0.64 |
| Showdown of the Secret Sense Scroll TechniquesExtreme Force · 078 | Extreme Force | 078 | Common | €0.02 |
| ShreddderAbsolute Powerforce · 030 | Absolute Powerforce | 030 | Common | €0.06 |
| Shrine of Mist ValleyOrder of Chaos · 060 | Order of Chaos | 060 | Rare | €0.08 |
| ShrinkShonen Jump Championship 2006 Prize Card · 003 | Shonen Jump Championship 2006 Prize Card | 003 | Ultra Rare | €0.10 |
| Shuffle RebornDimension of Chaos · 053 | Dimension of Chaos | 053 | Common | €0.04 |
| Shura the Combat StarBattles of Legend: Relentless Revenge · 040 | Battles of Legend: Relentless Revenge | 040 | Ultra Rare | €0.20 |
| Shurit, Strategist of the NekrozThe Secret Forces · 010 | The Secret Forces | 010 | Super Rare | $0.26 |
| ShutendojiStardust Overdrive · 095 | Stardust Overdrive | 095 | Secret Rare | €0.09 |
| ShuttleroidUnlisted Printings | Unlisted Printings | — | — | — |
| Side Effects?Clash of Rebellions · 080 | Clash of Rebellions | 080 | Short Print | $0.16 |
| Signal WarriorDuel Power · 006 | Duel Power | 006 | Ultra Rare | €0.14 |
| Signs of the TistinaDuelist Nexus · 092 | Duelist Nexus | 092 | Common | €0.05 |
| Silent AbyssStrike of Neos · 025 | Strike of Neos | 025 | Common | €0.07 |
| Silent AnglerDuelist Saga · 002 | Duelist Saga | 002 | Ultra Rare | €0.06 |
| Silent BurningDuelist Pack: Rivals of the Pharaoh · 005 | Duelist Pack: Rivals of the Pharaoh | 005 | Super Rare | €2.46 |
| Silent DoomGladiator's Assault · 094 | Gladiator's Assault | 094 | Secret Rare | €0.09 |
| Silent GraveyardThe Shining Darkness · 060 | The Shining Darkness | 060 | Common | $0.11 |
| Silent InsectShadow of Infinity · 020 | Shadow of Infinity | 020 | Common | €0.11 |
| Silent MagicianDuelist Pack: Rivals of the Pharaoh · 002 | Duelist Pack: Rivals of the Pharaoh | 002 | Ultra Rare | €0.11 |
| Silent Magician LV4Yu-Gi-Oh! Nightmare Troubadour promotional cards · 001 | Yu-Gi-Oh! Nightmare Troubadour promotional cards | 001 | Super Rare | €0.06 |
| Silent Magician LV8Yu-Gi-Oh! Nightmare Troubadour promotional cards · 002 | Yu-Gi-Oh! Nightmare Troubadour promotional cards | 002 | Super Rare | €0.05 |
| Silent Magician, the Silent FighterUnlisted Printings | Unlisted Printings | — | — | — |
| Silent Magician ZeroLegacy of Destruction · 003 | Legacy of Destruction | 003 | Secret Rare | €0.72 |
| Silent PaladinDuelist Pack: Rivals of the Pharaoh · 003 | Duelist Pack: Rivals of the Pharaoh | 003 | Ultra Rare | €4.36 |
| Silent Psychic MagicianDuelist's Advance · 038 | Duelist's Advance | 038 | Super Rare | $0.19 |
| Silent Psychic WizardExtreme Victory · 025 | Extreme Victory | 025 | Super Rare | €0.12 |
| Silent Sea NettleBrothers of Legend · 029 | Brothers of Legend | 029 | Ultra Rare | $0.28 |
| Silent StriderThe Duelist Genesis · 036 | The Duelist Genesis | 036 | Common | €0.05 |
| Silent Sword SlashDuelist Pack: Rivals of the Pharaoh · 004 | Duelist Pack: Rivals of the Pharaoh | 004 | Super Rare | €2.33 |
| Silent SwordsmanDuelist Pack: Rivals of the Pharaoh · 001 | Duelist Pack: Rivals of the Pharaoh | 001 | Ultra Rare | €0.02 |