| Soprano the Melodious SongstressCrossed Souls · 010 | Crossed Souls | 010 | Common | €0.17 |
| Sorcerer of Dark MagicMovie Pack · 002 | Movie Pack | 002 | Common | $2.41 |
| Sorcerer of SebekPhantom Nightmare · 053 | Phantom Nightmare | 053 | Common | €0.07 |
| Sorcerer of the DoomedStarter Deck: Yugi · 038 | Starter Deck: Yugi | 038 | Common | €0.02 |
| Sorcerer of the SwampChaos Origins · 024 | Chaos Origins | 024 | Common | €0.10 |
| Sorcerous Spell WallSuper Starter: Space-Time Showdown · 021 | Super Starter: Space-Time Showdown | 021 | Common | €0.17 |
| Sorciere de FleurYu-Gi-Oh! 5D's World Championship 2011: Over the Nexus promotional cards · 002 | Yu-Gi-Oh! 5D's World Championship 2011: Over the Nexus promotional cards | 002 | Super Rare | €0.03 |
| Sosei Ryu-Ge MistvaCrossover Breakers · 034 | Crossover Breakers | 034 | Ultra Rare | $1.31 |
| Soul-Absorbing Bone TowerAncient Sanctuary · 011 | Ancient Sanctuary | 011 | Rare | €0.25 |
| Soul AbsorptionInvasion of Chaos · 046 | Invasion of Chaos | 046 | Common | €0.04 |
| Soul Binding GateBrothers of Legend · 022 | Brothers of Legend | 022 | Ultra Rare | $0.12 |
| Soul ChargeDragons of Legend · 014 | Dragons of Legend | 014 | Super Rare | €0.29 |
| Soul CrossingEgyptian God Deck: Obelisk the Tormentor · 002 | Egyptian God Deck: Obelisk the Tormentor | 002 | Ultra Rare | €0.21 |
| Soul DemolitionLegacy of Darkness · 014 | Legacy of Darkness | 014 | Common | €0.08 |
| Soul Devouring Bamboo SwordGladiator's Assault · 060 | Gladiator's Assault | 060 | Common | €0.05 |
| Soul DrainReturn of the Duelist · 078 | Return of the Duelist | 078 | Rare | €3.35 |
| Soul Drain DragonShadow Specters · 013 | Shadow Specters | 013 | Common | $0.03 |
| SouleaterPharaonic Guardian · 003 | Pharaonic Guardian | 003 | Common | $0.13 |
| Souleating OviraptorDinosmasher's Fury Structure Deck · 002 | Dinosmasher's Fury Structure Deck | 002 | Super Rare | €0.10 |
| Soul Energy MAX!!!2022 Tin of the Pharaoh's Gods · 272 | 2022 Tin of the Pharaoh's Gods | 272 | Ultra Rare | $0.21 |
| Soul ExchangeStarter Deck: Yugi · 041 | Starter Deck: Yugi | 041 | Super Rare | €0.09 |
| Soul FistMaze of the Master · 057 | Maze of the Master | 057 | Super Rare | $0.18 |
| Soul HunterAstral Pack Seven · 021 | Astral Pack Seven | 021 | Short Print | €12.23 |
| Soulicer CrystalMaze of Muertos · 042 | Maze of Muertos | 042 | Rare | $0.08 |
| Soul LevyChaos Impact · 079 | Chaos Impact | 079 | Common | €0.13 |
| Soul of FireForce of the Breaker · 031 | Force of the Breaker | 031 | Super Rare | $0.51 |
| Soul of Purity and LightLabyrinth of Nightmare · 066 | Labyrinth of Nightmare | 066 | Common | €0.06 |
| Soul of SilvermountainReturn of the Duelist · 048 | Return of the Duelist | 048 | Super Rare | $5.14 |
| Soul of the PureTournament Pack: 2nd Season · 015 | Tournament Pack: 2nd Season | 015 | Rare | €0.12 |
| Soul of the Supreme Celestial KingAge of Overlord · 069 | Age of Overlord | 069 | Common | €0.06 |
| Soul of the Supreme KingMaze of Memories · 027 | Maze of Memories | 027 | Rare | €0.06 |
| Soul PendulumDuel Power · 013 | Duel Power | 013 | Ultra Rare | $0.11 |
| Soul ReleaseMetal Raiders · 058 | Metal Raiders | 058 | Common | €0.20 |
| Soul ResonatorStructure Deck: The Crimson King · 001 | Structure Deck: The Crimson King | 001 | Ultra Rare | €1.34 |
| Soul ResurrectionAncient Sanctuary · 109 | Ancient Sanctuary | 109 | Rare | €0.08 |
| Soul ReversalAncient Sanctuary · 088 | Ancient Sanctuary | 088 | Common | €0.13 |
| Soul RopeLight of Destruction: Special Edition · 2 | Light of Destruction: Special Edition | 2 | Super Rare | €0.09 |
| Soul ScissorsDarkwing Blast · 029 | Darkwing Blast | 029 | Common | €0.07 |
| Soul ServantLegendary Duelists: Magical Hero · 003 | Legendary Duelists: Magical Hero | 003 | Ultra Rare | $6.34 |
| Souls of the ForgottenPharaoh's Servant · 098 | Pharaoh's Servant | 098 | Common | €0.02 |
| Soul StrikeSecrets of Eternity · 099 | Secrets of Eternity | 099 | Common | €0.04 |
| Soul TakerGladiator's Assault · 092 | Gladiator's Assault | 092 | Secret Rare | €0.12 |
| Soul TigerInvasion of Chaos · 003 | Invasion of Chaos | 003 | Common | €0.05 |
| Soul TokenUnlisted Printings | Unlisted Printings | — | — | $1.15 |
| Soul TransitionSecrets of Eternity · 078 | Secrets of Eternity | 078 | Secret Rare | $0.79 |
| Soul UnionMaze of Muertos · 028 | Maze of Muertos | 028 | Rare | $0.14 |
| Soul UnsealUnlisted Printings | Unlisted Printings | — | — | €5.03 |
| SoundproofedExtreme Victory · 060 | Extreme Victory | 060 | Rare | €3.46 |
| Sound the Retreat!Photon Shockwave · 077 | Photon Shockwave | 077 | Short Print | $0.22 |
| Sour Scheduling - Red Vinegar VamoosePhoton Hypernova · 079 | Photon Hypernova | 079 | Common | €0.04 |