| Super Solar NutrientCrimson Crisis · 058 | Crimson Crisis | 058 | Common | €0.17 |
| Super Soldier RebirthDimension of Chaos · 070 | Dimension of Chaos | 070 | Common | €0.04 |
| Super Soldier RitualDimension of Chaos · 056 | Dimension of Chaos | 056 | Rare | €0.17 |
| Super Soldier ShieldDimension of Chaos · 071 | Dimension of Chaos | 071 | Ultra Rare | $0.37 |
| Super Soldier SoulDimension of Chaos · 021 | Dimension of Chaos | 021 | Common | €0.10 |
| Super Soldier SynthesisRaging Tempest · 062 | Raging Tempest | 062 | Common | €0.12 |
| Supersonic Skull FlameYu-Gi-Oh! 5D's Wheelie Breakers Promotional Cards · 001 | Yu-Gi-Oh! 5D's Wheelie Breakers Promotional Cards | 001 | Super Rare | €2.18 |
| Super Starslayer TY-PHON - Sky CrisisAge of Overlord · 042 | Age of Overlord | 042 | Ultra Rare | $0.37 |
| Super Strident BlazeLegendary Duelists: White Dragon Abyss · 015 | Legendary Duelists: White Dragon Abyss | 015 | Rare | €0.02 |
| Super Team Buddy Force Unite!Flames of Destruction · 081 | Flames of Destruction | 081 | Secret Rare | €0.10 |
| Super Vehicroid Jumbo DrillPower of the Duelist · 036 | Power of the Duelist | 036 | Super Rare | €0.12 |
| Super Vehicroid - Mobile BaseLegendary Duelists · 030 | Legendary Duelists | 030 | Super Rare | €0.32 |
| Super Vehicroid - Stealth UnionGladiator's Assault · 041 | Gladiator's Assault | 041 | Secret Rare | €0.08 |
| SuperviseWarriors' Strike Structure Deck · 017 | Warriors' Strike Structure Deck | 017 | Common | $0.11 |
| Super War-LionPremium Pack 2 (TCG) · 001 | Premium Pack 2 (TCG) | 001 | Super Rare | €0.13 |
| SupplyLabyrinth of Nightmare · 075 | Labyrinth of Nightmare | 075 | Short Print | €0.02 |
| Supply Soldier of the Indestructible InsectsRage of the Abyss · 081 | Rage of the Abyss | 081 | Common | €0.09 |
| Supply SquadSuper Starter: Space-Time Showdown · 022 | Super Starter: Space-Time Showdown | 022 | Common | €0.05 |
| Supporter in the ShadowsUnlisted Printings | Unlisted Printings | — | — | €1.26 |
| Suppression ColliderChaos Impact · 001 | Chaos Impact | 001 | Common | $0.06 |
| Supremacy BerryRaging Battle · 060 | Raging Battle | 060 | Short Print | €0.16 |
| Supreme Arcanite MagicianStarstrike Blast · 038 | Starstrike Blast | 038 | Ultra Rare | €9.67 |
| Supreme King Dragon Clear WingCode of the Duelist · 039 | Code of the Duelist | 039 | Rare | €0.06 |
| Supreme King Dragon Dark RebellionCode of the Duelist · 041 | Code of the Duelist | 041 | Rare | €0.08 |
| Supreme King Dragon DarkwurmMaximum Crisis · 019 | Maximum Crisis | 019 | Common | €0.10 |
| Supreme King Dragon LightwurmAge of Overlord · 002 | Age of Overlord | 002 | Common | €0.09 |
| Supreme King Dragon Odd-EyesCode of the Duelist · 015 | Code of the Duelist | 015 | Rare | €0.09 |
| Supreme King Dragon Starving VenomCode of the Duelist · 038 | Code of the Duelist | 038 | Rare | €0.16 |
| Supreme King Gate InfinityMaximum Crisis · 018 | Maximum Crisis | 018 | Super Rare | €0.10 |
| Supreme King Gate MagicianAge of Overlord · 001 | Age of Overlord | 001 | Super Rare | €0.95 |
| Supreme King Gate ZeroMaximum Crisis · 017 | Maximum Crisis | 017 | Super Rare | €0.09 |
| Supreme King's CastleLegendary Duelists: Immortal Destiny · 015 | Legendary Duelists: Immortal Destiny | 015 | Rare | €0.11 |
| Supreme King Z-ARCMaximum Crisis · 039 | Maximum Crisis | 039 | Secret Rare | €0.19 |
| Supreme King Z-ARC - Synchro UniverseLegacy of Destruction · 100 | Legacy of Destruction | 100 | Super Rare | €0.02 |
| Supreme RageCode of the Duelist · 070 | Code of the Duelist | 070 | Common | €0.02 |
| Supreme Sea MareDimension Force · 030 | Dimension Force | 030 | Common | €0.04 |
| Supreme Sovereign Serpent of GolgondaLightning Overdrive · 004 | Lightning Overdrive | 004 | Super Rare | €0.14 |
| SurfaceGeneration Force · 049 | Generation Force | 049 | Super Rare | €0.13 |
| Surfacing Big JawsRage of the Abyss · 001 | Rage of the Abyss | 001 | Ultra Rare | €0.50 |
| Surge BlitzcliqueChaos Origins · 011 | Chaos Origins | 011 | Secret Rare | $6.45 |
| Surgical Striker - H.A.M.P.Magnificent Mavens · 001 | Magnificent Mavens | 001 | Ultra Rare | €0.02 |
| Surgical Striker - S.P.E.C.T.R.A.Legendary Modern Decks 2026 · 32 | Legendary Modern Decks 2026 | 32 | Ultra Rare | $0.12 |
| Surprise ChainDimension Force · 068 | Dimension Force | 068 | Common | €0.04 |
| Surprise FusionBattles of Legend: Glorious Gallery · 041 | Battles of Legend: Glorious Gallery | 041 | Secret Rare | €0.49 |
| Survival InstinctStructure Deck: Dinosaur's Rage · 029 | Structure Deck: Dinosaur's Rage | 029 | Common | $0.20 |
| Survival of the FittestShadow Specters · 079 | Shadow Specters | 079 | Common | €0.10 |
| Survival's EndDinosmasher's Fury Structure Deck · 030 | Dinosmasher's Fury Structure Deck | 030 | Super Rare | €0.05 |
| Susa SoldierLegacy of Darkness · 066 | Legacy of Darkness | 066 | Rare | €0.27 |
| Susurrus of the Sinful SpoilsThe Infinite Forbidden · 060 | The Infinite Forbidden | 060 | Super Rare | €0.16 |
| Suture RebirthCrossed Souls · 055 | Crossed Souls | 055 | Rare | $0.15 |