| EarthquakeAncient Sanctuary · 043 | Ancient Sanctuary | 043 | Common | €0.06 |
| Earthquake GiantDuelist Revolution · 001 | Duelist Revolution | 001 | Common | €0.09 |
| EarthshakerPharaoh's Servant · 014 | Pharaoh's Servant | 014 | Common | €0.02 |
| Earthshattering EventWorld Superstars · 042 | World Superstars | 042 | Prismatic Secret Rare | $0.34 |
| Eater of MillionsRaging Tempest · 032 | Raging Tempest | 032 | Common | $0.12 |
| EatgaboonMagic Ruler · 065 | Magic Ruler | 065 | Common | €0.02 |
| Ebisu Shinsen MatsuriBattles of Legend: Glorious Gallery · 049 | Battles of Legend: Glorious Gallery | 049 | New | €0.03 |
| Ebon ArrowCrimson Crisis · 069 | Crimson Crisis | 069 | Common | €0.10 |
| Ebon High MagicianThe Dark Illusion · 052 | The Dark Illusion | 052 | Super Rare | $0.19 |
| Ebon Illusion MagicianWeekly Shonen Jump November 2014 membership promotional card · 070 | Weekly Shonen Jump November 2014 membership promotional card | 070 | Ultra Rare | $0.43 |
| Ebon Magician CurranCybernetic Revolution · 031 | Cybernetic Revolution | 031 | Common | €0.04 |
| Ebon SunBattles of Legend: Terminal Revenge · 027 | Battles of Legend: Terminal Revenge | 027 | Secret Rare | €0.34 |
| Eccentric BoyDuelist Pack: Yusei 2 · 014 | Duelist Pack: Yusei 2 | 014 | Super Rare | €0.37 |
| Ecclesia and the Dark DragonBurst Protocol · 041 | Burst Protocol | 041 | Secret Rare | €38.34 |
| Echelon of the Fire KingsStructure Deck: Fire Kings · 033 | Structure Deck: Fire Kings | 033 | Super Rare | $0.05 |
| Echo OscillationSecrets of Eternity · 079 | Secrets of Eternity | 079 | Common | €0.04 |
| Eclipse, Dragon Ruler of CatastrophesAlliance Insight · 048 | Alliance Insight | 048 | Ultra Rare | $1.22 |
| Eclipse TwinsSupreme Darkness · 047 | Supreme Darkness | 047 | Super Rare | €0.78 |
| Eclipse WyvernDragons Collide Structure Deck · 003 | Dragons Collide Structure Deck | 003 | Super Rare | €0.32 |
| Ecole de ZoneBrothers of Legend · 021 | Brothers of Legend | 021 | Secret Rare | €0.26 |
| Eco, Mystical Spirit of the ForestReturn of the Duelist · 091 | Return of the Duelist | 091 | Rare | $0.23 |
| EctoplasmerSoul of the Duelist · 043 | Soul of the Duelist | 043 | Super Rare | $0.08 |
| Ectoplasmic FortificationMaze of Muertos · 008 | Maze of Muertos | 008 | Secret Rare | $2.46 |
| Ectoplasmic Fortification!Speed Duel: Arena of Lost Souls · 01 | Speed Duel: Arena of Lost Souls | 01 | Super Rare | €0.53 |
| Eda the Sun MagicianLightning Overdrive · 093 | Lightning Overdrive | 093 | Super Rare | €0.06 |
| Edea the Heavenly SquireEmperor of Darkness Structure Deck · 003 | Emperor of Darkness Structure Deck | 003 | Super Rare | $0.26 |
| Edge HammerDuelist Pack: Jaden Yuki 2 · 029 | Duelist Pack: Jaden Yuki 2 | 029 | Super Rare | €0.32 |
| Edge Imp ChainCrossed Souls · 013 | Crossed Souls | 013 | Common | €0.02 |
| Edge Imp Cotton EaterSoul Fusion · 093 | Soul Fusion | 093 | Common | €0.05 |
| Edge Imp FrightfuloidCrossed Souls · 015 | Crossed Souls | 015 | Common | €0.07 |
| Edge Imp SabresThe New Challengers · 014 | The New Challengers | 014 | Super Rare | €0.28 |
| Edge Imp SawCrossed Souls · 012 | Crossed Souls | 012 | Common | $0.11 |
| Edge Imp ScytheRise of the Duelist · 022 | Rise of the Duelist | 022 | Common | €0.17 |
| Edge Imp TomahawkCrossed Souls · 014 | Crossed Souls | 014 | Rare | €0.23 |
| Edge of the RingSavage Strike · 068 | Savage Strike | 068 | Common | €0.04 |
| E - Emergency CallEnemy of Justice · 039 | Enemy of Justice | 039 | Common | $0.42 |
| Effect VeilerDuelist Revolution · 002 | Duelist Revolution | 002 | Ultra Rare | €0.18 |
| Ego BoostPhoton Shockwave · 046 | Photon Shockwave | 046 | Common | €0.02 |
| Egotistical ApeDuelist Revolution · 008 | Duelist Revolution | 008 | Rare | €0.17 |
| Egyptian God SlimeLegendary Duelists: Rage of Ra · 001 | Legendary Duelists: Rage of Ra | 001 | Ultra Rare | $0.36 |
| Egyptian God Slime, Protector of the Sun GodUnlisted Printings | Unlisted Printings | — | — | — |
| Ehren, Lightsworn MonkLight of Destruction · 082 | Light of Destruction | 082 | Secret Rare | €0.29 |
| Ehther the Heavenly MonarchEmperor of Darkness Structure Deck · 000 | Emperor of Darkness Structure Deck | 000 | Ultra Rare | $0.11 |
| Eidos the Underworld MonarchDuelist's Advance · 017 | Duelist's Advance | 017 | Ultra Rare | $3.09 |
| Eidos the Underworld SquireEmperor of Darkness Structure Deck · 002 | Emperor of Darkness Structure Deck | 002 | Super Rare | $0.26 |
| Einherjar TokenUnlisted Printings | Unlisted Printings | — | — | — |
| EinroidMaze of Muertos · 046 | Maze of Muertos | 046 | Rare | €0.10 |
| EisbahnPhoton Shockwave · 079 | Photon Shockwave | 079 | Rare | €0.08 |
| Eka the Flame BuddyPower of the Elements · 034 | Power of the Elements | 034 | Super Rare | €0.05 |
| Ekhajar, Descendant Dragon of the Ice BarrierUnlisted Printings | Unlisted Printings | — | — | — |