| Exchange of the SpiritElemental Energy Sneak Peek Participation Card · 004 | Elemental Energy Sneak Peek Participation Card | 004 | Ultra Rare | €0.07 |
| Excode TalkerExtreme Force · 038 | Extreme Force | 038 | Ultra Rare | €0.07 |
| Execute ProtocolsStructure Deck: Rokket Revolt · 034 | Structure Deck: Rokket Revolt | 034 | Common | €0.12 |
| Execution of the ContractIgnition Assault · 084 | Ignition Assault | 084 | Common | €0.03 |
| Exhausting SpellMagician's Force · 098 | Magician's Force | 098 | Common | €0.04 |
| Exiled ForceLegacy of Darkness · 023 | Legacy of Darkness | 023 | Super Rare | €0.15 |
| Exile of the WickedTournament Pack: 2nd Season · 004 | Tournament Pack: 2nd Season | 004 | Super Rare | $0.15 |
| Exodia NecrossDark Crisis · 020 | Dark Crisis | 020 | Ultra Rare | $0.19 |
| Exodia the Forbidden OneLegend of Blue Eyes White Dragon · 124 | Legend of Blue Eyes White Dragon | 124 | Ultra Rare | €0.02 |
| Exodia, the Legendary Defender2019 Gold Sarcophagus Tin · 003 | 2019 Gold Sarcophagus Tin | 003 | Prismatic Secret Rare | €0.57 |
| Exodia the ObliteratorUnlisted Printings | Unlisted Printings | — | — | — |
| Exodius the Ultimate Forbidden LordShonen Jump May 2008 subscription bonus · 025 | Shonen Jump May 2008 subscription bonus | 025 | Ultra Rare | €0.70 |
| Exosister ArmentThe Grand Creators · 022 | The Grand Creators | 022 | Rare | €0.06 |
| Exosister AsophielThe Grand Creators · 020 | The Grand Creators | 020 | Super Rare | €0.17 |
| Exosister BetrayalBurst Protocol · 066 | Burst Protocol | 066 | Super Rare | $0.13 |
| Exosister CarpedivemThe Grand Creators · 023 | The Grand Creators | 023 | Rare | €0.08 |
| Exosister ElisThe Grand Creators · 013 | The Grand Creators | 013 | Super Rare | €0.08 |
| Exosister GibrineThe Grand Creators · 019 | The Grand Creators | 019 | Super Rare | €0.10 |
| Exosister IreneThe Grand Creators · 015 | The Grand Creators | 015 | Rare | €0.15 |
| Exosister KarmaelBurst Protocol · 044 | Burst Protocol | 044 | Ultra Rare | €6.28 |
| Exosister KaspitellThe Grand Creators · 018 | The Grand Creators | 018 | Rare | €0.10 |
| Exosister MarthaPower of the Elements · 025 | Power of the Elements | 025 | Secret Rare | €0.17 |
| Exosister MikailisThe Grand Creators · 017 | The Grand Creators | 017 | Ultra Rare | €0.12 |
| Exosister PaxThe Grand Creators · 021 | The Grand Creators | 021 | Ultra Rare | €0.06 |
| Exosister ReturniaPower of the Elements · 076 | Power of the Elements | 076 | Super Rare | €0.15 |
| Exosisters MagnificaDimension Force · 046 | Dimension Force | 046 | Ultra Rare | €0.06 |
| Exosister SophiaThe Grand Creators · 016 | The Grand Creators | 016 | Ultra Rare | €2.76 |
| Exosister StellaThe Grand Creators · 014 | The Grand Creators | 014 | Super Rare | €0.25 |
| Exosister VadisThe Grand Creators · 024 | The Grand Creators | 024 | Super Rare | €0.07 |
| Expendable DaiLightning Overdrive · 084 | Lightning Overdrive | 084 | Super Rare | €0.08 |
| Exploder DragonYu-Gi-Oh! World Championship 2007 promotional cards · 002 | Yu-Gi-Oh! World Championship 2007 promotional cards | 002 | Super Rare | €0.19 |
| Exploder DragonwingRaging Battle · 040 | Raging Battle | 040 | Ultra Rare | $7.22 |
| Exploderokket DragonStructure Deck: Rokket Revolt · 004 | Structure Deck: Rokket Revolt | 004 | Common | €0.07 |
| Explosive MagicianStardust Overdrive · 044 | Stardust Overdrive | 044 | Ultra Rare | €0.32 |
| Explosive UrchinGeneration Force · 065 | Generation Force | 065 | Common | €0.06 |
| ExplossumSecrets of Eternity · 094 | Secrets of Eternity | 094 | Common | €0.02 |
| ExpressroidStarter Deck: Syrus Truesdale · 000 | Starter Deck: Syrus Truesdale | 000 | Ultra Rare | €0.11 |
| Express Train Trolley OlleyDragons of Legend · 037 | Dragons of Legend | 037 | Secret Rare | €0.06 |
| Expurrely HappinessAmazing Defenders · 017 | Amazing Defenders | 017 | Super Rare | €0.49 |
| Expurrely NoirAmazing Defenders · 018 | Amazing Defenders | 018 | Super Rare | €0.27 |
| Exstellarknight Constellar Ptolemy Ω7Battles of Legend: Glorious Gallery · 018 | Battles of Legend: Glorious Gallery | 018 | Secret Rare | €1.58 |
| Exterio's FangStarstrike Blast · 075 | Starstrike Blast | 075 | Common | €0.11 |
| Extinction on ScheduleClash of Rebellions · 081 | Clash of Rebellions | 081 | Common | $0.03 |
| EXTINGUISH!Amazing Defenders · 012 | Amazing Defenders | 012 | Rare | €0.06 |
| Extinguishing the AshenedLegacy of Destruction · 095 | Legacy of Destruction | 095 | Common | €0.05 |
| Extox HydraBattles of Legend: Monstrous Revenge · 007 | Battles of Legend: Monstrous Revenge | 007 | Secret Rare | €0.41 |
| Extra BuckClash of Rebellions · 079 | Clash of Rebellions | 079 | Rare | €0.07 |
| ExtraceratopsSavage Strike · 031 | Savage Strike | 031 | Common | €0.03 |
| Extra-Foolish BurialSoul Fusion · 065 | Soul Fusion | 065 | Super Rare | €0.06 |
| Extra GatePhoton Shockwave · 056 | Photon Shockwave | 056 | Super Rare | $0.28 |